PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.ME2Y5
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family bHLH
Protein Properties Length: 221aa    MW: 25350.2 Da    PI: 7.1992
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.ME2Y5genomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH24.45.1e-082574855
                 HHHHHHHHHHHHHHHHHCTSCCC...TTS-..STCHHHHHHHHHHHHHHH CS
          HLH  8 rErrRRdriNsafeeLrellPkaskapskK..lsKaeiLekAveYIksLq 55
                 +Er+RR++++  +++L +llP++++++ +K  l   + + kA +YIksL+
  Aradu.ME2Y5 25 IERNRRKHMKMLYSTLNSLLPNDPNPTRPKeaLLLLDQVDKALNYIKSLE 74
                 8*********************65333333358889999*********96 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088810.6641773IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000837.19E-61778No hitNo description
SuperFamilySSF474592.22E-101994IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003530.012379IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.105.5E-92387IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000104.3E-52574IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 221 aa     Download sequence    Send to blast
MDELESRSEA SPSSTNKEKI ERRFIERNRR KHMKMLYSTL NSLLPNDPNP TRPKEALLLL  60
DQVDKALNYI KSLEEKVKMS KEKKNSLLLR MGRKRTRGAC DDGNRPKPPQ LEVHEMGSCL  120
QIVMTCGLDS QFIFYKIIHI LNEENIDVKS ANSSLIGNSM HHVVHAEIPQ SLLQLGATKV  180
RESLKRFVQE PISKNELQSD HELLDFEIDT AELAELLDFL A
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
18294KKNSLLLRMGRKR
29197GRKRTRG
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015953734.11e-162PREDICTED: transcription factor bHLH118-like
TrEMBLA0A0B2RQ843e-72A0A0B2RQ84_GLYSO; Transcription factor bHLH36
TrEMBLI1LS393e-72I1LS39_SOYBN; Uncharacterized protein
STRINGGLYMA12G12880.19e-72(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF9063498
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G20970.11e-21bHLH family protein